uk.ac.ic.doc.automed.tml
Class PathwayOptimiser

java.lang.Object
  |
  +--uk.ac.ic.doc.automed.tml.PathwayOptimiser

public class PathwayOptimiser

extends java.lang.Object

Constructor Summary

PathwayOptimiser()

Method Summary

static TempPathway	optimisePathway(Pathway tp)
static TempPathway	optimisePathway(Pathway tp, boolean removeUncertainPairs)
static TempPathway	optimisePathway(Pathway tp, boolean removeUncertainPairs, PathwayOptimiserTool guiRef)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PathwayOptimiser

public PathwayOptimiser()

Method Detail

optimisePathway

public static TempPathway optimisePathway(Pathway tp)
                                   throws IntegrityException,
                                          InconsistentException,
                                          NotFoundException,
                                          NotOptimisableException

IntegrityException

InconsistentException

NotFoundException

NotOptimisableException

optimisePathway

public static TempPathway optimisePathway(Pathway tp,
                                          boolean removeUncertainPairs)
                                   throws IntegrityException,
                                          InconsistentException,
                                          NotFoundException,
                                          NotOptimisableException

IntegrityException

InconsistentException

NotFoundException

NotOptimisableException

optimisePathway

public static TempPathway optimisePathway(Pathway tp,
                                          boolean removeUncertainPairs,
                                          PathwayOptimiserTool guiRef)
                                   throws IntegrityException,
                                          InconsistentException,
                                          NotFoundException,
                                          NotOptimisableException

IntegrityException

InconsistentException

NotFoundException

NotOptimisableException