uk.ac.ic.doc.automed.tml
Class PathwayOptimiser

java.lang.Object
  uk.ac.ic.doc.automed.tml.PathwayOptimiser

public class PathwayOptimiser
extends java.lang.Object

Field Summary

static int	ADVANCED_ALGORITHM
static int	BASIC_ALGORITHM

Constructor Summary

PathwayOptimiser()

Method Summary

static TempPathway	optimisePathway(Pathway tp, boolean removeUncertainPairs, int algo)
static TempPathway	optimisePathway(Pathway tp, boolean removeUncertainPairs, PathwayOptimiserTool guiRef, int algo)
static TempPathway	optimisePathway(Pathway tp, int algo)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

BASIC_ALGORITHM

public static final int BASIC_ALGORITHM

See Also:

Constant Field Values

ADVANCED_ALGORITHM

public static final int ADVANCED_ALGORITHM

See Also:

Constant Field Values

Constructor Detail

PathwayOptimiser

public PathwayOptimiser()

Method Detail

optimisePathway

public static TempPathway optimisePathway(Pathway tp,
                                          int algo)
                                   throws IntegrityException,
                                          InconsistentException,
                                          NotFoundException,
                                          NotOptimisableException

Throws:

IntegrityException

InconsistentException

NotFoundException

NotOptimisableException

optimisePathway

public static TempPathway optimisePathway(Pathway tp,
                                          boolean removeUncertainPairs,
                                          int algo)
                                   throws IntegrityException,
                                          InconsistentException,
                                          NotFoundException,
                                          NotOptimisableException

Throws:

IntegrityException

InconsistentException

NotFoundException

NotOptimisableException

optimisePathway

public static TempPathway optimisePathway(Pathway tp,
                                          boolean removeUncertainPairs,
                                          PathwayOptimiserTool guiRef,
                                          int algo)
                                   throws IntegrityException,
                                          InconsistentException,
                                          NotFoundException,
                                          NotOptimisableException

Throws:

IntegrityException

InconsistentException

NotFoundException

NotOptimisableException