Publications 2011


Journal publications


  • M. Kuklisova-Murgasova, P. Aljabar, L. Srinivasan, S. J. Counsell, V. Doria, A. Serag, I. S. Gousias, J. P. Boardman, M. A. Rutherford, A. D. Edwards, J. V. Hajnal, D. Rueckert. A dynamic 4D probabilistic atlas of the developing brain. NeuroImage, 54(4): 2750-2763, 2011.
  • J. Lötjönen, R. Wolz, J. Koikkalainen, V. Julkunen, L. Thurfjell, R. Lundqvist, G. Waldemar, H. Soininen and D. Rueckert. Fast and robust extraction of hippocampus from MR images for diagnostics of Alzheimer's disease. NeuroImage, 56(1): 185-196, 2011.
  • R. A. Heckemann, S. Keihaninejad, P. Aljabar, K. R. Gray, C. Nielsen, D. Rueckert, J. V. Hajnal and Alexander Hammers. Automatic morphometry in Alzheimer's disease and mild cognitive impairment. NeuroImage, 56(4): 2024-2037, 2011.
  • J. Koikkalainen, J. Lötjönen, L. Thurfjell, D. Rueckert, G. Waldemar and H. Soininen. Multi-Template Tensor-Based Morphometry: Application to Analysis of Alzheimer's Disease. NeuroImage, 56(3): 1134-1144, 2011.
  • L. Risser, F. Vialard, R. Wolz, M. Murgasova, D. Holm and D. Rueckert. Simultaneous Multiscale Registration using Large Deformation Diffeomorphic Metric Mapping. IEEE Transactions on Medical Imaging, 30(10): 1746 – 1759, 2011.
  • P. Aljabar, R. Wolz, L. Srinivasan, S.J. Counsell, M. Rutherford, A.D. Edwards, J.V. Hajnal and D. Rueckert. A combined manifold learning analysis of shape and appearance to characterize neonatal brain development. IEEE Transactions in Medical Imaging, 30(12): 2072 – 2086, 2011.
  • R. Wolz, V. Julkunen, J. Koikkalainen, E. Niskanen, D. P. Zhang, D. Rueckert, H. Soininen, J. Lötjönen. Multi-Method Analysis of MRI Images in Early Diagnostics of Alzheimer’s Disease. PLoS One, 6(10): e25446, 2011.
  • F.-X. Vialard, L. Risser, D. Rueckert and C. J. Cotter. Diffeomorphic 3D Image Registration via Geodesic Shooting Using an Efficient Adjoint Calculation. International Journal of Computer Vision, 97(2): 229-241, 2012.
  • G. Ball, J. P. Boardman, D. Rueckert, P. Aljabar, T. Arichi, N. Merchant, I. S. Gousias, A. D. Edwards and S. J. Counsell. The Effect of Preterm Birth on Thalamic and Cortical Development. Cerebral Cortex, doi:10.1093/cercor/bhr176, 2011.


Conference publications


  • D. P. Zhang, X. Zhuang, S. Ourselin, and D. Rueckert. Motion tracking of left ventricle and coronaries in 4D CTA. SPIE Medical Imaging 2011: Image Processing, Proc. 7962, 2011.
  • C. Donoghue, A. Rao, A. M. J. Bull and D. Rueckert. Manifold learning for automatically predicting articular cartilage morphology in the knee with data from the osteoarthritis initiative (OAI). SPIE Medical Imaging 2011: Image Processing, Proc. 7962, 2011.
  • B. Chen, H. Naito, Y. Nakamura, T. Kitasaka, D. Rueckert, H. Honma, H. Takabatake, M. Mori, H. Natori and K. Mori. Automatic segmentation and identification of solitary pulmonary nodules on follow-up CT scans based on local intensity structure analysis and non-rigid image registration. SPIE Medical Imaging 2011: Computer Aided Diagnosis, Proc. 7963, 2011.
  • D. V. N. Luong, D. Rueckert, and B. Rustem. Incorporating hard constraints into non-rigid registration via nonlinear programming. SPIE Medical Imaging 20011: Image Processing, Proc. 7962, 2011.
  • G. Sandbach, S. Zafeiriou, M. Pantic and D. Rueckert: A dynamic approach to the recognition of 3D facial expressions and their temporal models. IEEE International Conference on Automatic Face and Gesture Recognition (FG 2011), 406-413, 2011.
  • R. Wolz, P. Aljabar, J. V. Hajnal, J. Lotjonen, D. Rueckert. Manifold Learning Combining Imaging with Non-Imaging Information. IEEE International Symposium on Biomedical Imaging (ISBI), 1637-1640, 2011.
  • J. Lötjönen, R. Wolz, J. Koikkalainen, L. Thurfjell, R. Lundqvist, G. Waldemar, H. Soininen, D. Rueckert. Improved Generation of Probabilistic Atlases for the Expectation Maximization Classication. IEEE International Symposium on Biomedical Imaging (ISBI), 1839-1842, 2011.
  • K. Gray, R. Wolz, S. Keihaninejad, R. Heckemann, P. Aljabar, A. Hammers, D. Rueckert. Regional Analysis of FDG-PET for use in the Classication of Alzheimer's disease. IEEE International Symposium on Biomedical Imaging (ISBI), 1082-1085, 2011.
  • A. Serag, P. Aljabar, S. Counsell, J. Boardman, J. V. Hajnald and D. Rueckert. Tracking developmental changes in subcortical structures of the preterm brain using multi-modal MRI. IEEE International Symposium on Biomedical Imaging (ISBI), 349-352, 2011.
  • K.-P. Tung, W. Shi, R. De Silva, E. Edwards, D. Rueckert. Automatical vessel wall detection in intravascular coronary OCT. IEEE International Symposium on Biomedical Imaging (ISBI), 610-613, 2011.
  • F. Deligianni, E. Robinson, D. Sharp, A. D. Edwards, D. Rueckert and D. C. Alexander. Inference of functional connectivity from direct and indirect structural brain connections. IEEE International Symposium on Biomedical Imaging (ISBI), 849-852, 2011.
  • F. Deligianni, E. Robinson, C. F. Beckmann, D. Sharp, A. D. Edwards, D. Rueckert. Exploiting hierarchy in structural brain networks. IEEE International Symposium on Biomedical Imaging (ISBI), 871-874, 2011.
  • R. A. Heckemann, S. Keihaninejad, P. Aljabar, K. R. Gray, C. Nielsen, D. Rueckert, J. V. Hajnal, A. Hammers. A repository of MR morphometry data in Alzheimer's disease and mild cognitive impairment. IEEE International Symposium on Biomedical Imaging (ISBI), 875-878, 2011.
  • T. A. Darvann, N. V. Hermann, S. Demant, P. Larsen, H. Ólafsdóttir, S. S. Thorup, M. Zak, A. B. Lipira, A. A. Kane, D. Govier, H. Schatz, D Rueckert and S. Kreiborg. Automated quantification and analysis of facial asymmetry in children with arthritis in the temporomandibular joint. IEEE International Symposium on Biomedical Imaging (ISBI), 1193-1196, 2011.
  • A. Serag, P. Aljabar, S. Counsell, J. Boardman, J. V. Hajnal and D. Rueckert. Construction of a 4D atlas of the developing brain using non-rigid registration. IEEE International Symposium on Biomedical Imaging (ISBI), 1532-1535, 2011.
  • L. Pizarro, J. Delpiano, P. Aljabar, J. Ruiz-del-Solar and D. Rueckert. Towards dense motion estimation in light and electron microscopy. IEEE International Symposium on Biomedical Imaging (ISBI), 1939-1942, 2011.
  • X. Zhuang, W. Shi, S. G. Duckett, H. Wang, R. Razavi, D. J. Hawkes, D. Rueckert and S. Ourselin: A Framework Combining Multi-sequence MRI for Fully Automated Quantitative Analysis of Cardiac Global And Regional Functions. Functional Imaging and Modeling of the Heart (FIMH), LNCS 6666, 367-374, 2011.
  • W. Shi, X. Zhuang, H. Wang, S. G. Duckett, D. O’Regan, P. J. Edwards, S. Ourselin and D. Rueckert. Automatic Segmentation of Different Pathologies from Cardiac Cine MRI Using Registration and Multiple Component EM Estimation. Functional Imaging and Modeling of the Heart (FIMH), LNCS 6666, 163-170, 2011.
  • J. Xi, Pablo Lamata, W. Shi, S. Niederer, S. Land, D. Rueckert, S. G. Duckett, A. Shetty, C. A. Rinaldi, R. Razavi and N. Smith. Automatic Segmentation of Left Atrial Scar from Delayed-Enhancement Magnetic Resonance Imaging. Rashed Karim, Aruna Arujuna, Alex Brazier, Jaswinder Gill and C. Aldo Rinaldi, et al. Functional Imaging and Modeling of the Heart (FIMH), LNCS 6666, 63-70, 2011.
  • An Automatic Data Assimilation Framework for Patient-Specific Myocardial Mechanical Parameter Estimation. Functional Imaging and Modeling of the Heart (FIMH), LNCS 6666, 392-400, 2011.
  • F. Deligianni, G. Varoquaux, B. Thirion, E. C. Robinson, D. J. Sharp, A. D. Edwards, D. Rueckert: A Probabilistic Framework to Infer Brain Functional Connectivity from Anatomical Connections. IPMI 2011: 296-307
  • R. Guerrero, R. Wolz, D. Rueckert: Laplacian Eigenmaps Manifold Learning for Landmark Localization in Brain MR Images. MICCAI (2) 2011: 566-573